Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847173.1_cds_XP_016509931.1_22824
CDS Infomation

[gene=LOC107827346] [db_xref=GeneID:107827346] [protein=protein IQ-DOMAIN 14-like] [protein_id=XP_016509931.1] [location=complement(join(132335..133135,133432..133563,133995..134228,135251..135703,136227..136301))] [gbkey=CDS]
Sequence

ATGGGGAAGAAAGGCAGTTGGTTTTCTGCTATCAAAAGGGTGTTTACACCCAGCTCTAAG
GAGAAGCTACCCAATGAATCAGAGAAGAAAAGTGCTAAGGAAAAGAAAGGTCGCGGAAAA
CTGAAGCATGGAGAGAACAAATCATTTATTCCTCTCTTCAGAGAGCCAAGTAGTATTGAG
AAAATACTGGGAGAAGCAGATGAACAAAAACTACTTACTCCAAGATTCACTTTACCTAGT
GTCGACTCTCCTCGGGCTTCTTCTTATAGAGTTGCCTCTCCTACTGCTACTTCTCCAAGA
GTTGCCTCTCCTAAGGTTTCTTCCCACAGGCTTAATTCTCCGAAGGCTGCCTCTCAAAGG
GTTACTTCTCCTAAGGTCCCGACTCCAAGGATTTCTTCTCCTAAAGCTACTTCTCCTAAG
GTTAATCGAAATCGCAAAGAAATCAGCTATGCTTATAGACCAGAACCAACTTTGAGGAAT
CTCCAGCTTTCAGCAACCAAGATACAGGCAGCCTACAGAGGTTACATGGCAAGGAGGAGT
TTCCGAGCATTGAGGGGTTTAGTAAGGCTTCAAGGAGTGGTGAGGAGTAGTAATGTAAAA
AAGCAAACAGCAAATGCCATGAAGCAGATGCAACTTCTGGTTAGGGTCCAAACTCAAATT
CAGTCAAGGAGGATCCAAATGTTGGAAAACCAGGCACTTCAACACCAAGCATACAGGAAC
GATAAGGACGTTGAGAGCATCACGAGCAAATGGACTCAGCTGTGTGAGGCAGGTAACCAT
GATAATTGGGATGATAGTTTGCTAACCAAAGAAGAAGTAGAAGCAAGGATGCGGAAGAAA
GTGGAGGCAGTCATCAAAAGGGAGAGAGCAATGGCATATGCCTATTCTCACCAGCTATGG
AAAGGTGATCCAAAATCGGCTCTGGACATGGGAGCTAGTGGATTGTGGTGGAATTGGTTT
GAACGCCAGCCACCTTCTGAAAATGCATACAAGGGCCAATCTACTGTGAAAGATATCAAC
CTAACAACACCAAGAACGATTTCAGAGCACAAACCAAGTCCAACTCCGCTAAACAATAAT
TTGAGACACCTATTCTCGGAGTACAATAATCATGAATCGGTCACACCAGCAAGGGCAATT
TCAGAGCACAAACCAAGTCCAACACCTCTAAACAACAATTTCAGACGCATACTCTCTGAT
TACGATAACCATGAATCGGTCACACCAATGTCAACCAAGTCAGCATTTCCAACAAGGGGA
AAACAAATGCATACTCCAAGTAGAACACCACCAGTGAACAGCTCAAGTCTAAGAAAGTAT
TCAAGAACCAGAGCTAGTGCTACTAACTACCCTTTTGATCTTCCATTGAAGGACGACGAT
AGCCTCACGAGCTGCCCTCCCTTTTCGGCTCCACATTACATGGCACCTACTGTCTCAGCT
AAAGCTAAACTCAGAGCAAGTAGCAATCCTAAGGAGAGAATTTCATCAAAACCATCCAGT
GACACAAAGAAAAGATTTTCCTTCCCTTTGACTCCAAATATTTGGTCTTCCAAATGGAGC
AAAGGTTCTGGAAAGGATTCTGCTTCTCGAAAAGAAGTCGATAAACAAGAGTCTATGGCG
GATCATATAAGTGTGGATTCAACTGTCTCAATGCCCGCAGTAGTTGGGAGGAGACCATTT
AACAGATTTGTGTGA

Peptide Sequence

PEP ID

XP_016509931.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana tabacum]
Sequence

MGKKGSWFSAIKRVFTPSSKEKLPNESEKKSAKEKKGRGKLKHGENKSFIPLFREPSSIE
KILGEADEQKLLTPRFTLPSVDSPRASSYRVASPTATSPRVASPKVSSHRLNSPKAASQR
VTSPKVPTPRISSPKATSPKVNRNRKEISYAYRPEPTLRNLQLSATKIQAAYRGYMARRS
FRALRGLVRLQGVVRSSNVKKQTANAMKQMQLLVRVQTQIQSRRIQMLENQALQHQAYRN
DKDVESITSKWTQLCEAGNHDNWDDSLLTKEEVEARMRKKVEAVIKRERAMAYAYSHQLW
KGDPKSALDMGASGLWWNWFERQPPSENAYKGQSTVKDINLTTPRTISEHKPSPTPLNNN
LRHLFSEYNNHESVTPARAISEHKPSPTPLNNNFRRILSDYDNHESVTPMSTKSAFPTRG
KQMHTPSRTPPVNSSSLRKYSRTRASATNYPFDLPLKDDDSLTSCPPFSAPHYMAPTVSA
KAKLRASSNPKERISSKPSSDTKKRFSFPLTPNIWSSKWSKGSGKDSASRKEVDKQESMA
DHISVDSTVSMPAVVGRRPFNRFV

Transcript Sequence

Gene sequence data has not been registered.